Package: dpseg 0.1.3

dpseg: Piecewise Linear Segmentation by Dynamic Programming

Piecewise linear segmentation of ordered data by a dynamic programming algorithm. The algorithm was developed for time series data, e.g. growth curves, and for genome-wide read-count data from next generation sequencing, but is broadly applicable. Generic implementations of dynamic programming routines allow to scan for optimal segmentation parameters and test custom segmentation criteria ("scoring functions").

Authors:Rainer Machne [aut, cre], Peter F. Stadler [aut]

dpseg_0.1.3.tar.gz
dpseg_0.1.3.zip(r-4.7)dpseg_0.1.3.zip(r-4.6)dpseg_0.1.3.zip(r-4.5)
dpseg_0.1.3.tgz(r-4.6-x86_64)dpseg_0.1.3.tgz(r-4.6-arm64)dpseg_0.1.3.tgz(r-4.5-x86_64)dpseg_0.1.3.tgz(r-4.5-arm64)
dpseg_0.1.3.tar.gz(r-4.7-arm64)dpseg_0.1.3.tar.gz(r-4.7-x86_64)dpseg_0.1.3.tar.gz(r-4.6-arm64)dpseg_0.1.3.tar.gz(r-4.6-x86_64)
dpseg_0.1.3.tgz(r-4.6-emscripten)
manual.pdf |manual.html
card.svg |card.png
dpseg/json (API)

# Install 'dpseg' in R:
install.packages('dpseg', repos = c('https://raim.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://gitlab.com/raim/dpseg

Uses libs:
  • c++– GNU Standard C++ Library v3
Datasets:
  • oddata - Escherichia coli growth curves.

On CRAN:

Conda:

cpp

4.54 score 1 packages 23 scripts 246 downloads 8 exports 1 dependencies

Last updated from:6206a2395d. Checks:11 WARNING, 2 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-arm64WARNING129
linux-devel-x86_64WARNING124
source / vignettesOK197
linux-release-arm64WARNING138
linux-release-x86_64WARNING118
macos-release-arm64WARNING186
macos-release-x86_64WARNING266
macos-oldrel-arm64WARNING210
macos-oldrel-x86_64WARNING302
windows-develWARNING102
windows-releaseWARNING110
windows-oldrelWARNING128
wasm-releaseOK102

Exports:addLmbacktrace_rdpsegdpseg_oldestimatePmoviescanPsgtable

Dependencies:Rcpp

Piecewise Linear Segmentation by Dynamic Programming

Rendered fromdpseg.Rmdusingknitr::rmarkdownon May 12 2026.

Last update: 2025-02-18
Started: 2020-07-30